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KCL 4BBY1013 Biomedical Science Biochemistry $6.43
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KCL 4BBY1013 Biomedical Science Biochemistry

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Lecture 9 onwards notes

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  • March 8, 2021
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  • Class notes
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  • Lecture 9 onwards

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L9
Protein Synthesis I
Professor Robert Hinges

Explain the terms 'transcription' and 'translation' and identify sites of transcription and translation in
prokaryotic and eukaryotic cells

Transcription

 Transcription is the process by which the information in a strand of DNA is copied into a new
molecule of messenger RNA (mRNA)

Translation

 Translation is the process by which a protein is synthesized from the information contained
in a molecule of messenger RNA (mRNA)

Locations

 Prokaryotes
o Transcription and translation are coupled; that is, translation begins while the mRNA
is still being synthesized

 Eukaryotes
o Transcription occurs in the nucleus
o Translation occurs in the cytoplasm




Outline the mechanism of RNA synthesis in prokaryotic cells

 RNA polymerase enzymes make RNA

 Addition of nucleotides in a 5’ → 3’ direction

 Requires a template, the two strands of DNA need to be separated

 Like in DNA, the nucleotides in RNA are joined by covalent phosphodiester bonds

,Transcription has 3 Main steps:

 Initiation

o RNA polymerase is directed to the start site of transcription on the double stranded
DNA. Enzyme finds transcriptional start site

o RNA polymerase is a protein complex ααββ’

o Sigma factor (s) dissociates shortly after transcription initiation starts

 Elongation

o Reading of DNA sequence on template and synthesis of a messenger RNA

 Termination

o Reaching of transcriptional termination site, mRNA synthesis finishes

o Termination controlled by STOP sequences in DNA

o These are GC rich regions that mean the RNA transcript forms a hairpin loop

o Termination sometimes requires assistance of a protein, rho (r)




Identify ways
in which eukaryotic transcription differs from prokaryotic transcription

 More complex --> more Proteins involved:

o Polymerases

o Initiation factors

, o Elongation factors

o Other helper proteins

 Additional mRNA Processing

 In eukaryotes, only fully processed mRNA can be exported from the nucleus and is made
available for translation

 Some hnRNAs can be spliced in different ways, resulting in different protein product from a
single gene



Describe the post-transcriptional modifications that occur in eukaryotic cells during conversion of
the primary transcript (heteronuclearRNA or hnRNA) to mRNA

 Capping:

o Formation of 7-methylguanosine cap at 5’ end
o GTP “reacts” with 5’ end of mRNA resulting in
addition to 5’ phosphate group (5’ – 5’ bond)
o The guanine is methylated at 7’ position

 Splicing:

o Removal of intronic segments

 Polyadenylation:

o Addition of tail to 3’ end of RNA
o Complex process; Essentially adds 50 – 250
adenosine residues to end of RNA chain
o Added to 3’ end, as normal




Explain the terms "exon“ and "intron”

 Exons:

o Regions of DNA within a gene unit that are found in mature mRNA = “expressed”
regions.

 Introns:

, o Regions of DNA within a gene unit that are not found in mature mRNA =
“intervening” regions.

o Do not code for any amino acids in mature protein




Lecture 10
Protein Synthesis II
Professor Robert Hinges

Describe the structures and functions of the different types of RNA (mRNA, tRNA and rRNA)

Structures

 mRNA

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