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Programmed Cell Death: Apoptotic Process

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Lecture notes of 6 pages for the course CANCER BIOLOGY LECTURE NOTES at University of East Anglia (#2)

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  • October 29, 2024
  • 6
  • 2022/2023
  • Class notes
  • Dr helen james
  • All classes
  • Unknown
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L8: APOPTOSIS [10/10/2022]



I. MOLECULAR PLAYER IN APOPTOSIS

 Caspases: proteolytic enzymes mediate apoptosis by triggering cell death by cleaving specific
proteins in the cytoplasm and nucleus.
- It exists in all cells as inactive precursors or procaspases which are usually activated by
cleavage by other caspases, producing a proteolytic caspase cascade



II. EXTERNAL SIGNALS

 Also known as “death receptors”
 Detect presence of extracellular death signals and, in
response, rapidly ignite the cell’s intrinsic apoptotic
machinery
 Death receptors initiate apoptosis independent of p53
There are 30 members in total:
- Cysteine rich extracellular domains
- Cytoplasmic “death domain” (DD)
 TRAIL has been shown to induce apoptosis through binding
its respective receptors, DR4 and DR5
- Ligation of TRAIL to its receptor results in trimerization
of the receptor [ Trimer of FasL binds 3 Fas molecules]
- Clustering of the receptor’s intracellular [clustering of
Death Domains DD]
 Leads the formation of the death-inducing
signalling complex (DISC)
- Adapter protein FADD (Fas associated death domain, or
Mort1) binds via DD = DISC
- FADD also contains DED (death effector domain) that
binds to analogous domain in pro-caspase 8 (FLICE,
MACH)
- DED = CARD (caspase recruitment domain)
 Pro-caspase 8 drives own activation by self-cleavage
 Caspase 8 activates down-stream effector caspases (eg caspase 3) committing cell to
apoptosis

III. DEATH RECEPTORS

 Membrane bound FasL is ~39kDa
 Proteolytically cleaved by MMPs
- Soluble form (26kDa) sFasL
 Both forms can self-associate and trimerize, after which it can bind with the receptor Fas

Inhibitors of Fas induced signalling:

, - FAP-1 (Fas-associated phosphates- 1) inhibits Fas export to cell surface
- SODD (silencer of (TNFR1) death domain) prevents trimerization
- FLIP inhibits FLICE (=caspase 8)



 TNF is produced mainly by activated macrophages
and T cells in response to infection
 TNFR1
- Activation of transcription factors
- Pro-inflammatory and immunomodulatory genes
 Adapter protein TRADD (TNFR associated DD) bids via
DD
 FADD or RIP bind to TRADD via DD
 FADD activation leads to apoptosis if other signals
blocked = context dependent
 TNFR1-TRADD-FADD-caspase 8 = DISC death-inducing
signal complex



NIK = NF-kB inducing kinase

IKK = inhibitor kB kinase



IV. EXTRINSIC APOPTOSIS

 Extrinsic pathway that
initiates apoptosis is triggered
by a death ligand binding to a
death receptor, such as TNF-α
to TNFR1.
- [ TNFR family is a large
family consisting of 29
transmembrane receptor
proteins, organised in
homotrimers and activated
by binding of respective
ligand (s)]

V. INTRINSIC APOPTOSIS

 Intrinsic pathway that initiates apoptosis (also known as mitochondrial apoptosis) can be
activated by a plethora of stimuli, including intracellular damage (to virtually any of
subcellular compartments) and by the so-called oncogenic stress,
 Triggered by mitochondrial outer membrane permeabilization

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