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FRNSC 421 - EXAM 3-Questions with Correct Answers/ Verified/ 100% Pass

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FRNSC 421 - EXAM 3-Questions with Correct Answers/ Verified/ 100% Pass

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  • August 7, 2024
  • 9
  • 2024/2025
  • Exam (elaborations)
  • Questions & answers
  • FRNSC
  • FRNSC
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MikeHarris
FRNSC 421 - EXAM 3-Questions with Correct Answers/ Verified/ 100% Pass
lineage markers - ✔️✔️useful for assisting with the identification of related individuals separated
by generational events

- Y DNA paternally inherited

- mtDNA maternally inherited



Thomas Jefferson case - ✔️✔️Y-STR analysis on descendent of Eston Hemmings to determine if
Thomas Jefferson had an affair with his slave Sally Hemmings

- showed that Eston is related to the Jefferson family, cannot conclusively say it was Thomas who
fathered him

- Tom Woodson, Sally's eldest son, more closely related to Thomas Jefferson's nephew



applications of Y-STR testing - ✔️✔️- ID & historical cases to verify relationships

- sexual assault evidence when autosomal STR data produces minor mixed male profile

- verification of familial testing outcomes, identifying potential paternal relatives of potential
perpetrators

- paternity testing in motherless cases



Y chromosome structure - ✔️✔️has lost ~97% of its genes over the last 300 million years, estimated
to lose all genes within the next 10 million

- has male-specific region (MSY) and synonymous non-recombining portion (NRY)

- lowest gene but highest repetitive sequences/copy number variants

- sex-determining gene in Yp arm



Yfiler - ✔️✔️tests for 16 loci and 17 alleles, including:

- european minimal haplotype loci (MHL) = 8 loci, 9 alleles

- SWGDAM 10 loci

- Yflier has 6 additional loci

- Yfiler Plus has 9 additional loci (10 alleles); 3 highly diverse single allele loci, and 6 rapidly mutating
loci including one multi-locus marker



PowerPlex Y23 - ✔️✔️tests for 22 loci and 23 alleles

, - only 2 rapidly mutating loci



DYS385 a/b - ✔️✔️one of 10 SWGDAM loci

- duplicated a and b regions ~40 kb apart facing away from one another

- result of a translocation event duplicating/inverting the locus

- counted as a single locus, use same forward/reverse primers

- results in "heterozygote" profiles when a ≠ b; reported as such, but isn't classified as such



DYS389 I/II - ✔️✔️one of 10 SWGDAM loci

- I and II loci "on top of" one another

- same mutational event as DYS385a/b, except not inverted

- defined as two loci that are close together

- same forward/reverse primer used, but the reverse only sits down once

- reported as separate loci even though they're in the same location



SRY gene - ✔️✔️sex-determining region of the Y chromosome

- encodes testis determining factor (TDF, or SRY protein)

- found on Yp arm



TDF - ✔️✔️testis determining factor, initiates male differentiation

- DNA binding protein that positively regulates the expression of genes involved with development
of sex cords that later form seminiferous tubules

- without TDF, embryo remains female and sex cords develop into ovarian follicle cells

- mutations result in female phenotypes in XY (Swyer syndrome)

- translocations to X chromosome causes XX male syndrome



Quantifiler Duo - ✔️✔️targets untranslated region of SRY gene, not an intronic sequence (SRY has
no introns)

- amplicon size: 130 bps

- different amplification conditions than HP: 2 mins at 50°C, 10 min at 95°, 40 cycles of 95°C for 15
sec & 60°C for 1 min

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