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Statistics III Summary Second Partial exam

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Summary of the second partial exam of Statistics III

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  • 2 juni 2020
  • 11 juni 2020
  • 11
  • 2019/2020
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ANOVA and Code variables
ANOVA as a regression model
An ANOVA is a special case of regression
To put it differently: A regression with categorical independent variables is equivalent to ANOVA.
ANOVA stands for: analysis of variance

- Categorical/nominal IVs: Variables for which each case is placed into one of several available
categories. (Example: Gender, treatment group in an experiment).
- Categories must be mutually exclusive and exhaustive.
- Categories are not necessarily ordered.
- Categorical/nominal IVs can be included in a multiple regression model.
- How? By using sets of code variables:
# categories = g (groups) =⇒ # code variables = (g − 1)
- How to code categorical IVs? We will see several procedures:
1. Dummy variable coding
2. Contrasts coding

How to choose and make code-variables?
- AKA: indicator variable, 0-1 variable, dummy variable
For every observation you code
z = 1 if the person is from a certain group (e.g., Male)
z = 0 if the person is not from a certain group (e.g, Female)
For more than two groups you need multiple dummy-variables
- Number of groups = g, then the number of code variables g – 1
- Overall effect does not depend on different coding systems (e.g., same R, R 2, F − test)
- interpretation of individual regression coefficients differs on different coding schemes
-
Dummy-variable coding; Also known as reference coding.
Reference coding: Assign one group as ‘reference group’.
- That group: All Ci = 0.
- Other groups: One Ci = 1 other Cj’s zero.

The reference group…
- should be useful for comparisons. (Example: Control group like the ‘placebo’ group in clinical
experiments).
- should be well defined (do not use dubious groups like ‘other’).
- should not have (much) smaller sample size than the other groups.
Remember: The choice of the reference group is based on research goals and not on statistical
reasons.

Dummy-variable coding: Interpreting bi ’s




Conclusion: In general,
a = MRef.group, the sample mean of reference group.

, bi = Mi − MRef.group, the difference between the sample mean of group i and the sample mean of the
reference group (i = 1, 2, . . .).
Note: The dummy variables Ci correlate, hence the bi ’s are partial regression coefficients (and the
sr2i ’s do not sum up to R2Y ).

Dummy coding is limited: Using dummy coding you can compare general group means with a
reference mean but what if you want to know about other mean differences? In this case you can
set-up planned comparisons using contrast coding.
Contrast coding:
Test hypotheses using contrasts (linear combinations of the groups means).




Follow these rules to uniformize contrast codings:




Advantage and disadvantages regression versus ANOVA
Disadvantage:
- It is more complicated
- A researcher might not always know what means he is interested in
Advantage:
- It is easier and more natural to combine continuous and categorical independent variables
- ANOVA will estimate all possible interactions and with regression there is less testing
o Thus, less data fishing or p-hacking as with regression hypotheses have to be
specified in advance
o Better control overall error rate
o Less type 1 errors
o More power


Repeated Measures ANOVA
‘Usual’ ANOVA: Limitation
So far, we only allowed each subject to contribute with one score (one measurement) on the DV:
“Different subjects contribute to different means.”
What if each subject is measured in ALL levels of the treatment factor?
>> Repeated measures (M)ANOVA
- Generalization of paired sample t-test to more than 2 groups.
Imagine the following situations:
 Situation 1. A group of subjects is measured under various treatment conditions (or at different
points in time).
 Situation 2. Subjects are grouped according to their gender and measured under various
treatment conditions (or at different points in time).

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