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Summary Drug synthesis and retro synthesis

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Drug design and mechanisms of drug action - 1st semester Includes bullet points, key diagrams and images

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  • June 8, 2023
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Drug Synthesis and Retro-synthesis

Synthesis Order

 Lead discovery:
 Synthesis of diverse structures in high-throughput-screening
 Large number of compounds (10,000)
 Emphasis on speed not yield
 Lead optimisation:
 Find hits from lead discovery
 Synthesis of related analogues
 Smaller number of compounds (1000)
 Process chemistry:
 Synthesis of promising compounds
 Small number of compound but large scale (10)
 Product manufacture:
 Synthesis of approved drug for trials
 Singular compound but large scale
 Production under GMP

Scaffolds and Skeletons of Drug Molecules

 Key central scaffold which functional groups are attached to
 Useful when synthesising
 Linear- alkane, alkene and alkyne
 Cyclic- carbocyclic, heterocyclic, aromatic and herteroaromatic
 Ionisable- amine, guanidine and carboxylic acid
 Polar- alcohol, phenol, sulphonamide, ether, thioether and halogen
 Carbonyl- ketone, ester, urea, amide and carbamate

Drug Synthesis

 Starting material (SM) should be cheap and easily available
 Sequence of steps changes SM into target molecule (TM)
 Synthesis- a series of reactions that leads forward from an SM to the TM
 Retro-synthesis- mental process for planning a synthesis by moving backwards
from the TM and simplify back to a SM

Retro-Synthesis Terminology

 Starting material (SM)
 Target material (TM)
 Types of reactions:
 Functional group inter-conversion (FGI)
 Functional group addition (FGA)
 Functional group removal (FGR)
 Disconnection- break a bond to form a precursor
 Synthon- ideal fragment produced by disconnection
 Synthetic equivalent- reagent or compound that corresponds to a synthon



Disconnection

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