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Summary Biological Molecules A-level AQA notes

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This document provides detailed notes on Biological molecules as well as the required practicals that are linked to this topic. These notes were developed when the new specification was released and were used to achieve an A*. I have since then been studying Medicine at KCL and I am now in my fourt...

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  • June 5, 2024
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Biology
3.1 Biological Molecules
3.1.1 Monomers and Polymers – variety of life but similar biochemical basis
 Monomers – smaller units from which larger molecules are made (monosaccharides, amino
acids, nucleotides)
 Polymers – molecules made from large number of monomers joined together in
polymerisation reaction
 Condensation reaction – joins two molecules together by forming chemical bond, water
molecule eliminated
 Hydrolysis – breaks chemical bond and uses water molecules (lysis = splitting)
3.1.2 Carbohydrates
 Benedict test (CuSO4) = semi-quantitative -> estimates approximate amount
 Reducing sugars donate electrons – Benedict and heat for brick red precipitate
 Non-reducing (sucrose) - Add HCl and boil in water, HCl hydrolyses into constituent
monosaccharides, NaHCO3 added to neutralise as Benedict doesn’t work in acidic
conditions, Benedict and heat for brick red precipitate
 Starch = iodine dissolved in potassium iodide - blue/black colour change from orange
brown
 Calibration curve – dilution series of known glucose conc., Benedict + heat, remove
precipitate, calibrate colourimeter w water, record % light transmissions for each, y axis =
DV, x axis = IV, plot values, line of best fit
 How to use – find % first, draw horizontal line from percentage to curve and draw vertical
line down to conc.
 Monosaccharides = monomers from which larger carbohydrates are made (soluble)
 Monosaccharides – glucose (fruit), fructose = pentagonal (fruit, nectar), galactose (milk) –
hexose sugars
 Glucose = 2 isomers – alpha / beta as elements arranged in different ways (Low Body Arms
Hats Who Are You?)
 Condensation reaction between monosaccharides -> glycosidic bond and water molecule is
removed
 Hydrolysis reaction under certain conditions breaks disaccharide into constituent
monosaccharides
Disaccharides (condensation of two monosaccharides to form a glycosidic bond) – all are
C12H22O11
1. Maltose (two alpha glucose, 1-4) 2. Sucrose (glucose and fructose) 3. Lactose (glucose and
galactose) Polysaccharides = molecules made from many monosaccharides joined together by
condensation reactions
1. Glycogen - animals, alpha, storage molecule, 1-4 / lots of 1-6, coiled so compact, insoluble so
doesn’t affect water potential, quickly hydrolysed bc of branches = enzymes act
simultaneously – alpha glucose for respiration
2. Starch - plants, alpha, storage molecule, 1-4 / some 1-6, helical so compact, insoluble so
doesn’t affect water potential, large so cannot leave cell membrane -> in seeds and storage
organs like potato tubers
3. Cellulose - plants, beta, 1-4, long straight chains linked by many H bonds to form microfibrils
to provide strength to cell wall, insoluble = doesn’t affect water potential, H / OH on C1
inverted, H bonds collectively = structural
3.1.3 Lipids – Emulsion test -> crush / grind adding ethanol and then water creates white emulsion
Control = use water as sample, final solution should remain clear

,  Energy, water insoluble, electrical insulators - myelin sheath, both insoluble (phospholipid as
whole uncharged)
 Triglycerides - condensation between one glycerol C3H8O3 + 3 molecules fatty acids COOHR
= ester bonds
 RCOOH= R group saturated / unsaturated hydrocarbon, 3 water molecules produced
 Saturated = only single bonds between C-C / unsaturated = double bonds between C-C
(mono/poly-unsaturated)
 Saturated fats – more dense, more viscous, higher bp as more IM forces – requires more
energy to be broken
 Non-polar = not water soluble = osmotic pressure unaffected, high C-H proportion = energy
store
 Phospholipid – one fatty acid of triglyceride substituted for phosphate - containing group, 2
fatty acids, glycerol
 Phosphate head is polar = hydrophilic, two fatty acid tails are hydrophobic, contains ester
bonds
 Bilayer = hydrophilic heads on outside, hydrophobic tails on inside, transfer of lipid-soluble
substances
Proteins – Biuret test -> NaOH and few drops of Copper II Sulphate = blue to mauve
3.1.4.1 Properties
 Amino acids = monomers from which proteins are made (amine group, side chain and
carboxyl group)
 Twenty naturally - occurring amino acids common in all organisms differ only in side group -
evolution evidence
Primary Structure /1^ Sequence of amino acids Peptide bonds between
amine group of one amino
acid and carboxyl group of
another amino acid.

Secondary Structure /2^ Polypeptide chain is folded Hydrogen bonding between
to give the secondary N-H of one amino acid and
structure. It can be an alpha C=O of another amino acid.
helix or beta pleated sheet.

Tertiary Structure /3^ Further folding of the Bonding between the R
secondary structure to make groups of different amino
a specific (unique) shape acids:
(globular / fibrous)
1.ionic bonding 2. Hydrogen
bonding 3. Disulphide
bonding (covalent)

Quaternary Structure /4^ More than one 1 polypeptide Bonding between the R
chain OR polypeptide chain groups of different amino
interacting with a non- acids:
protein (prosthetic) group
1.ionic - weaker 2. Hydrogen
(e.g. haem iron group in
– weakest 3. Disulphide
haemoglobin)
bonding (covalent) - strong

3.1.4.2 Proteins as Enzymes – biological catalyst

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