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Lecture notes of 858 pages for the course IB Biology at Arı Anatolian High School (full textbook)

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, HIGHER LEVEL




P E A R SO N B ACC A L AU R E AT E

HIGHER LE VEL

Biology 2nd Edition

ALAN DAMON • RANDY McGONEGAL • PATRICIA TOSTO • WILLIAM WARD


Supporting every learner across the IB continuum




A01_BIO_SB_IBDIP_9007_PRE.indd 1 26/11/2014 15:08

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, Sons (Karp, Gerald 2009), fig. 9.57 (b), p. 361, Copyright © 2009 Wiley, reproduced urmc.rochester.edu/MediaLibraries/URMCMedia/life-sciences-learning-center/
with permission of John Wiley & Sons, Inc.; Figure 11.32 adapted from http://arbl. documents/DNA_Microarrays_and_Cancer.pdf, p. 13, Copyright © 2007,
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kind permission from Springer Science and Business Media; Figure on page 569 1990 (Robinson, S. K. et al 1995), Copyright © 1995 by The American Association
from Ethology: The mechanisms and evolution of behaviour, W. W. Norton for the Advancement of Science, reprinted with permission from AAAS; Figure on
(Gould, James L. 1982), p.392, Copyright © 1982 by James L. Gould. Used by page 715 adapted from Temperature and embryonic development in relation to
permission of W. W, Norton & Company Inc.; Figure on page 570 (top) adapted spawning and field occurrence of larvae of three Antarctic echinoderms, The
from Odor plumes and animal navigation in turbulent water flow: a field study, The Biological Bulletin, 194, pp. 44–52 (Stanwell-Smith, D. and Peck, L. S. 1998), with
Biological Bulletin, 188, pp. 111–116 (Zimmer-Faust, Richard K. et al 1995), with permission from the Marine Biological Laboratory, Woods Hole, MA; Figure 14.4
permission from the Marine Biological Laboratory, Woods Hole, MA; Figure on from Kangeroos and climate: an analysis of distribution, Journal of Animal Ecology,
page 570 (bottom) from Advanced Biology, Cambridge University Press (Jones, M. 56, pp. 741–761 (Caughley, G. et al. 1987), THE JOURNAL OF ANIMAL
and Jones, G. 1997), reproduced with permission; Figure on page 571 (top) from ECOLOGY by BRITISH ECOLOGICAL SOCIETY, Reproduced with permission of
Ecology: principles and applications, Cambridge University Press (Chapman, J. L. and Blackwell Publishing Ltd. in the format Educational/Instructional Program via
Reiss, M. J. 1999), p. 72, reproduced with permission; Figure on page 571 (bottom) Copyright Clearance Center; Figures 14.16, 14.17 and 14.18 adapted from Species
adapted from Prior classical olfactory conditioning improves odour-cued flight dynamics and nutrient accumulation during early primary succession in coastal
orientation of honey bees in a wind tunnel, Journal of Experimental Biology, 208 (19), sand dunes, Journal of Ecology, 81, pp. 693–706, fig. 1, 10 and 6 respectively (Olff, H.,
October, pp. 3731–3737 (Chaffiol, A. et al. 2005), adapted with permission from Huisman, J. and Van Tooren, B. S. 1993), The JOURNAL OF ECOLOGY by
Journal of Experimental Biology, reproduced with permission of COMPANY OF BRITISH ECOLOGICAL SOCIETY, Reproduced with permission of Blackwell
BIOLOGISTS LTD. in the format Republish in a book via Copyright Clearance Publishing Ltd. in the format Educational/Instructional Program via Copyright
Center; Figure on page 572 adapted from Organization of the primate retina: Clearance Center; Figure 14.27 adapted from Lost at sea: where is all the plastic?,
electron microscopy, Proceedings of the Royal Society of London. Series B, Biological Science, 304, 7 May (Thompson, v et al 2004), reproduced with permission from the
Sciences, 166 (1002), pp. 80–111 (Dowling, J. E. And Boycott, B. B. 1966), © 1966, author; Figure 14.28 adapted from http://www.combat-fishing.com/
The Royal Society, by permission of the Royal Society; Figure 12.15 from https:// SFWOzStrmUpper.JPG, reproduced with permission; Figures 14.29, 14.30 and
faculty.washington.edu/chudler/brainsize.html, reproduced with permission; 14.31 from Mercury bioaccumulation and biomagnification in Ozark stream
Figure 12.16 from https://faculty.washington.edu/chudler/functional.html, ecosystems, Ecotoxicology and Environmental Safety, 74 (8), November, pp. 2215–2224
reproduced with permission; Figure 12.27 from Neuroscience, 2nd ed., Sinauer (Schmitt, Christopher J. , Stricker, Craig A. and Brumbaugh, William G. 2011),
Associates (Purves, D., Augustine, G. J., Fitzpatrick, D. et al, eds. 2001), Copyright Copyright© 2011, with permission from Elsevier; Figure 14.38 from Liling Lee,
© 2001, Sinauer Associates, Inc.; Figure 12.28 after Neuroscience, 2nd ed., Sinauer The influence of edge effects on habitat suitability of western meadowlarks in east
Associates (Purves, D., Augustine, G. J., Fitzpatrick, D. et al., eds. 2001), fig. 15.3, p. bay regional park district grasslands, Spring 2013, http://nature.berkeley.edu/
320, Copyright © 2001, Sinauer Associates, Inc.; Figure 12.38 adapted from Ion classes/es196/projects/2013final/LeeL_2013.pdf [accessed 8/05/2014], reproduced
channels of excitable membrane, 3rd ed., Sinauer Associates, Inc. (Hille, B. 2001), fig. with permission; Figure on page 764 from Nutrition: Effect of vegetables on bone
7.1, p. 202, Copyright © 2001, Sinauer Associates, Inc.; Figure 12.39 from http:// metabolism, Nature, 401, 23 September, pp. 343–344 (Muhlbauer, Roman C. and
www.nobelprize.org/nobel_prizes/medicine/laureates/2000/press.html, Li, Feng 1999), Copyright ©1999, reprinted by permission from Macmillan
Copyright © The Nobel Committee for Physiology or Medicine; Figure 12.50 from Publishers Ltd.; Figure on page 792 from The relative effects of raptor predation
Repeated administration of MDMA causes transient down-regulation of serotonin and shooting on overwinter mortality of grey partridges in the United Kingdom,
5-HT2receptors, Neuropharmacology, 31 (9), pp. 881–893 (Scheffel, Ursula, Lever, Journal of Applied Ecology, 44 (5), pp. 972–982 (Watson, M. et al. 2007), Copyright
J.R., Stathis, M. And Ricaurte, G.A. 1992), with permission from Elsevier; Figure © 2007, John Wiley & Sons; Figure on page 800 (top) from scienceCourseware.org,
12.51 from Ascorbic acid prevents 3,4- Methylenedioxymethamphetamine- Permission courtesy of Virtual Courseware Project, California State University, Los
Induced Hydroxyl radical formation and the behavioral and neurochemical Angeles; Figure on page 803 from A time series of evolution in action: a latitudinal
consequences of the depletion of brain 5-H, Synapse, 40, pp. 55–64 (Shankaran,M., cline in wing size in South American Drosophila subobscura, Evolution, 58 (4), pp.
Yamamoto, B. K. and Gudelsky, G. A. 2001), Copyright © 2001 Wiley-Liss, Inc.; 768–780 (Gilchrist, G. W. et al 2004), Copyright © 2007, John Wiley and Sons.
Figure 12.55 adapted from Salmon breeding behavior and life history evolution in Maps
changing environments, Ecology, 72 (4), p. 1181 (Gross, Mart M. 1991) © 1991 by
The Ecological Society of America. Permission conveyed through Copyright Map 12.52 from “Speciation in real time,” Understanding Evolution, University of
Clearance Center, Inc.; Figure on page 636 adapted from Sunlight inactivation of California Museum of Paleontology, 7 May 2014, <http://evolution.berkeley.
fecal bacteriophages and bacteria in sewage-polluted seawater, Applied and edu/evolibrary/news/060101_batsars> Copyright ©2014 by The University of
Environmental Microbiology, 65 (8), pp. 3605–3613 (Sinton, L. W. et al. 1999), adapted California Museum of Paleontology, Berkeley, and the Regents of the University of
with permission from American Society for Microbiology; Figure on page 637 California.
adapted from Characterization of microbial consortia in a terephthalate-degrading Tables
anaerobic granular sludge system, Microbiology, 147, pp. 373–382 (Wu, Jer-Horng , Table 14.7 from Mercury bioaccumulation and biomagnification in Ozark stream
Liu, Wen-Tso, Tseng, I-Cheng and Cheng, Sheng-Shung 2001), © Society for ecosystems, Ecotoxicology and Environmental Safety, 74 (8), November, pp. 2215–2224
General Microbiology, reprinted with permission; Figure 13.5 from Advances in (Schmitt, Christopher J., Stricker, Craig A. and Brumbaugh, William G. 2011),
citric acid fermentation by aspergillus niger : biochemical aspects, membrane Copyright © 2011, with permission from Elsevier; Table on page 765 adapted
transport and modeling, Biotechnology Advances, 25, fig. 3, p. 250 (Papagianni, M. from Carbon dioxide transport and carbonic anhydrase in blood and muscle,
2007), Copyright ©2007, with permission from Elsevier; Figures 13.10 and 13.11 Physiological Reviews, 80, 4 January, pp. 681–715, tab. 1 (Geers, Cornelia and Gros,
from Risks and benefits of glyphosate-resistant crops, ISB News Report, January, fig. Gerolf 2000) © The American Physiological Society (APS). All rights reserved.
1 and fig. 2, p. 1 (Duke, Stephen O. and Cerdeira, Antonio L. 2007), reproduced
with permission; Figure 13.19 from Biodegradation of benzene by halophilic and Text
halotolerant bacteria under aerobic conditions, Applied and Environmental Quote on page 773 from Empirical model building and response surfaces, John Wiley &
Microbiology, 70 (2), pp. 1222–1225 (Nicholson, Carla A. and Fathepure, Babu Z. Sons, New York (Box, G. E. P. and Draper, N. R. 1987),p. 424, Copyright © 1987 by
2004), reproduced with permission from American Society for Microbiology; John Wiley & Sons, Inc.
Figure 13.20 from Bioremediation of automobile oil effluent by pseudomonas sp., In some instances we have been unable to trace the owners of copyright material,
Advanced Tech (now SciTech), June, 34, fig. 1 (Sathiya Moorthi, P., Deecaraman, M. and and we would appreciate any information that would enable us to do so.
Kalaichelvan, P.T. 2008), reproduced with permission; Figure 13.22 from http://
www.hypertextbookshop.com/biofilmbook/working_versionOld/contents/ Dedications
chapters/chapter002/section004/blue/page001.html, © MSU Center for Biofilm To my father, the late Dr William A. Damon, a man of principle, an intellectual
Engineering, P. Dirckx; Figure 13.23 from Persister cells, dormancy and infectious giant, and a dear friend.
disease, Nature Reviews Microbiology, 5, January, fig. 4, pp. 48–56 (Lewis, Kim 2007), Alan Damon
Copyright ©2007, reprinted by permission from Macmillan Publishers Ltd.; Figure
13.26 from Potential microbial bioinvasions via ships’ ballast water, sediment, and To my children and grandchildren. You are my future even when I am gone.
biofilm, Marine Pollution Bulletin, 55, fig. 1, p. 339 (Drake, Lisa A., Doblin, Martina A. Randy McGonegal
and Dobbs, Fred C. 2007), Copyright © 2007, with permission from Elsevier; I dedicate this book to my husband, who has been my editor and constant support.
Figures 13.27, 13.29, 13.33 and 13.36 from Introduction to biotechnology, Pearson
Education (Thieman, William J. and Palladino, Michael Angelo 2013), fig. 1.12, p. Pat Tosto
15, fig. 3.18, p. 87, fig. 3.6, p. 73 and fig. 11.15, p. 284 respectively, © 2013, p. 15, p. I dedicate this book to the most important people in my life, my family. You have
87, p. 73 and p. 284, reprinted and electronically reproduced by permission of allowed me to be more than I ever could have been without you.
Pearson Education, Inc., Upper Saddle River, New Jersey; Figure 13.28 from Life Bill Ward
Sciences Learning Center, DNA microarrays (gene chips) and cancer, http://www.

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