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Molecules Notes (Organic Chemistry) R304,69
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Molecules Notes (Organic Chemistry)

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in depth notes for organic chemistry, needed to pass the DIAMS and exam for this course. keywords explained with reaction schemes described

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  • November 4, 2024
  • 16
  • 2024/2025
  • Class notes
  • Prof. dr. ir. jan van hest
  • All classes
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, molecules
to be called organic, a molecule needs to have C and H
EX. CO2 H2O inorganic

1s elements are not involved in ochem

hybridisation sp3 = tetrahedral = 109.5°
sp2 = trigonal planar = 120°
sp = linear = 180°

bond order n° of covalent bonds shared by 2 atoms (single = bond order 1, double = bond order 2,
etc…)


* the greater the difference in electronegativity between atoms in a bond, the
more ionic the bond gets

more stable versions of molecules

carbon with lowest number is in front




newman projection assumes viewer is looking along the longitudinal axis of a C-C bond
the staggered and eclipsed conformations are two extremes. the staggered
conformer is more stable bc of stabilising interactions between C-H bond

steric strain repulsion between e- clouds of atoms/groups
- increases as size of atoms/groups increases

conformers anti = big groups opposite each gauche = big groups next
other to each other




greater steric strain in gauche bc the substituents are closer, called gauche
interaction


chair conformer completely free of strain, has bond angles of 111°, close to the ideal 109.5°


DIAMS on
Structure and properties of molecules, including stereochemistry
Resonance structures, conjugation and aromaticity

, equatorial (slanted sideways) and axial
bonds (vertical)

if A up, then E down & vice versa



ring flip conversion of cyclohexane between 2 stable chair conformers
- bonds that are equatorial in chair 1 are axial in chair 2

boat conformer free of angle strain, but C-H bonds are eclipsed and flagpole hydrogens make
steric hindrance, so not as stable


twist - boat more stable than boat
as flagpole H have
moved away

half - chair most unstable state



two chair conformers of monosubsituted cyclohexane are NOT equivalent
- the one with substitute in equatorial is more stable as it has more space
around it and thus less steric interactions
axial position means parallel to H, so
not as stable




1,3-diaxial steric interactions between axial substituent located on C1 of cyclohexane & H
interaction (or other substituents) on C3 and C5

cis isomers substituents on same side
geometric isomers, have different spatial
trans isomers substituents on different side arrangements


both cis and trans isomers have 2 chair conformations

both in equatorial is more stable for both isomers




stability: chair > twist-boat > boat > half-chair
most cyclohexanes are chair at any given moment

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